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Exports figure of variable(s) at depth over time.

ss_plot_variables.Rd

Output is not compatible with ggplot2 functions or ggplotly(). Use ss_ggplot_variables() to work with those functions.

Usage

ss_plot_variables(
  dat,
  title = "",
  color_palette = NULL,
  date_breaks_major = NULL,
  date_breaks_minor = NULL,
  date_labels_format = "%Y-%m-%d",
  standard_do_ylims = TRUE,
  standard_sal_ylims = TRUE,
  yaxis_newline = TRUE,
  alpha = 1,
  legend_name = "Depth (m)",
  legend_position = "right"
)

Arguments

dat

Water Quality data in long or wide format.

title

Title for plot. Default is no title.

color_palette

Color palette of hex colors onto which sensor_depth_at_low_tide_m will be mapped. Required if there are more than 6 levels in sensor_depth_at_low_tide_m. Default is pal = rev(viridis(6, option = "D")).

date_breaks_major

Intervals for major breaks. Default is selected by get_xaxis_breaks().

date_breaks_minor

Intervals for minor breaks. Default selected by get_xaxis_breaks().

date_labels_format

Format for the date labels. Default is YYYY-mm-dd.

standard_do_ylims

If TRUE, the y-limits for dissolved oxygen are set to c(60, 130) % or c(0, 15) mg/L. If FALSE, the y-limits are set to the ggplot default. Alternatively, a vector giving custom y-limits for the dissolved oxygen panel.

standard_sal_ylims

If TRUE, the y-limits for salinity are set to c(0, 35) PSU. If FALSE, the y-limits are set to the ggplot default. Alternatively, a vector giving custom y-limits for the salinity panel.

yaxis_newline

Logical argument indicating whether the units in the y-axis label should be on a new line. Default is TRUE.

alpha

Value indicating the transparency of the points. 0 is most transparent; 1 is opaque.

legend_name

Name for the legend. Must be a character string. Default is legend.name = "Depth (m)".

legend_position

Position for the legend. Passed to ggpubr. Default is legend.position = "right".

Value

Returns * object, a single figure with the plots for each variable in tidy.data stacked in a column is returned.

See also

Other plot: ss_get_colour_palette()

Author

Danielle Dempsey