Package index • sensorstrings

All functions

add_deployment_columns(): Add and reorder columns

check_n_rows(): Check number of rows of data file

convert_timestamp_to_datetime(): Convert timestamp to datetime

extract_aquameasure_tz(): Extract the timezone of aquameasure timestamps

extract_aquameasure_vars(): Extract the variables included in aquameasure file from the column names

extract_deployment_dates(): Extract deployment dates

extract_file_extension(): Extracts the extension of a file name

extract_hobo_ph_units(): Extract units from column names of hobo pH data

extract_hobo_sn(): Extract hobo serial number from the data file

extract_hobo_units(): Extract units from column names of hobo data

extract_vemco_tz(): Extract the timezone of vemco timestamps

filter_dat_to_plot(): Filter data before plotting to zoom in on interesting features

make_column_names(): Paste variable name and units to create column names

set_up_compile(): Set up parameters, Errors, and Warnings for the compile_** functions

ss_assemble_region_data(): Assemble region data

ss_check_station_drift(): Check station deployment and retrieval locations are within acceptable distance

ss_check_station_in_ocean(): Check station location is in the ocean (not on land)

ss_check_station_radius(): Check station location is within buffer of official coordinates

ss_compile_aquameasure_data(): Compile data from aquameasure sensors

ss_compile_deployment_data(): Compile aquameasure, hobo, tidbit, and vemco data from a single deployment

ss_compile_hobo_data(): Compile and format data from hobo or tidbit sensors

ss_compile_hobo_ph_data(): Compile and format data from hobo pH sensors (MX2501)

ss_compile_vemco_data(): Format temperature data from Vemco deployment

ss_convert_depth_to_ordered_factor(): Converts values in the depth column to an ordered factor

ss_convert_old_log(): Convert column names from old log into the new format

ss_coords_from_ddm_to_dd(): Convert coordinates from degree-minute-decimal to decimal degree

ss_create_log_from_metadata(): Writes a deployment log from the metadata tracking sheet

ss_create_old_log_from_metadata(): Writes a deployment log from the metadata tracking sheet

ss_create_variable_labels(): Create plot labels from variable names

ss_create_variable_labels_no_newline(): Create plot labels from variable names without new lines

ss_download_data(): Download deployment data from Google drive to the shared CMAR server

ss_export_county_files(): Export data into a csv and/or rds file

ss_export_path(): Generate file path and name to export compiled sensor string data

ss_format_report_table(): Format tables for summary report

ss_get_colour_palette(): Returns colour palette based on the unique values of sensor_depth_at_low_tide_m

ss_ggplot_variables(): Plot variables at depth

ss_import_data(): Import Water Quality data from rds files

ss_import_path(): Generate file path to import raw sensor string deployment data

ss_leaflet_station_map(): Interactive map of station location

ss_open_trimdates_app(): Open interactive plot

ss_parse_log(): Extract information from deployment log

ss_pivot_longer(): Pivot sensor string data from long to wide format

ss_pivot_wider(): Pivot sensor string data from wide to long format

ss_plot_variables(): Exports figure of variable(s) at depth over time.

ss_read_aquameasure_data(): Import data from aquameasure csv files

ss_read_hobo_data(): Import data from hobo or tidbit csv file

ss_read_log(): Read in deployment log

ss_read_log_old(): Extract information from old deployment log

ss_read_nsdfa_metadata(): Import TempMetaData tab from the NSDFA tracking sheet

ss_read_vemco_data(): Import data from vemco csv files

ss_reformat_old_data(): Convert old data structure to sensorstrings format

ss_set_up_folders(): Create folders for the raw sensor string data from a given deployment

ss_write_report_table(): Writes deployment table for county report

ss_xaxis_breaks(): Returns nice major and minor breaks and label format based on timespan of the data

trim_data(): Trim data to specified start and end dates.